Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotidyl transferase abieii/abigii toxin family protein | D9N32_RS21900 | Not Available | Positive | 3997369 - 3998289 | 34602.9 |
| tail fiber assembly protein | D9N32_RS28425 | Not Available | Negative | 3998443 - 3998535 | 3445.43 |
| lysr family transcriptional regulator | D9N32_RS21910 | Not Available | Negative | 3998723 - 3999607 | 33374.4 |
| alpha/beta hydrolase | D9N32_RS21915 | Not Available | Positive | 3999872 - 4000930 | 38737.7 |
| mfs transporter | D9N32_RS21920 | Not Available | Positive | 4001072 - 4002199 | 39320.7 |
| molybdenum cofactor insertion chaperone paod | D9N32_RS21925 | Not Available | Negative | 4002378 - 4003331 | 34761.8 |
| aldehyde oxidoreductase molybdenum-binding subunit paoc | D9N32_RS21930 | Not Available | Negative | 4003341 - 4005539 | 78130.9 |
| aldehyde oxidoreductase fad-binding subunit paob | D9N32_RS21935 | Not Available | Negative | 4005536 - 4006492 | 33888.8 |
| aldehyde dehydrogenase iron-sulfur subunit paoa | D9N32_RS21940 | Not Available | Negative | 4006489 - 4007178 | 24429.2 |
| yagu family protein | D9N32_RS21945 | Not Available | Positive | 4007585 - 4008199 | 22968.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





