Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma factor-binding protein crl | D9N32_RS21850 | Not Available | Positive | 3987553 - 3987954 | 15614.6 |
| phosphoporin phoe | D9N32_RS21855 | Not Available | Negative | 3987993 - 3989048 | 38968.1 |
| glutamate 5-kinase | D9N32_RS21860 | Not Available | Positive | 3989336 - 3990439 | 39058.9 |
| glutamate-5-semialdehyde dehydrogenase | D9N32_RS21865 | Not Available | Positive | 3990451 - 3991704 | 44690.7 |
| Trna-thr | Not Available | Not Available | Positive | 3991819 - 3991894 | Not Available |
| tail fiber assembly protein | D9N32_RS21875 | Not Available | Negative | 3991909 - 3992067 | 5857.82 |
| tail fiber assembly protein | D9N32_RS27640 | Not Available | Negative | 3992159 - 3992261 | 3820.68 |
| hypothetical protein | D9N32_RS21880 | Not Available | Negative | 3992258 - 3992728 | 17251.8 |
| rna-directed dna polymerase | D9N32_RS21890 | Not Available | Negative | 3993075 - 3996284 | 121943.0 |
| type iv toxin-antitoxin system abiei family antitoxin domain-containing protein | D9N32_RS21895 | Not Available | Positive | 3996600 - 3997382 | 29170.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





