Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tail fiber assembly protein | D9N32_RS21750 | Not Available | Positive | 3970083 - 3970394 | 12206.7 |
| 2-oxoglutaramate amidase | D9N32_RS21755 | Not Available | Negative | 3970489 - 3971259 | 28972.5 |
| ivy family c-type lysozyme inhibitor | D9N32_RS21760 | Not Available | Positive | 3971440 - 3971886 | 15996.1 |
| acyl-coa dehydrogenase fade | D9N32_RS21765 | Not Available | Negative | 3971929 - 3974373 | 89201.6 |
| d-sedoheptulose 7-phosphate isomerase | D9N32_RS21770 | Not Available | Positive | 3974613 - 3975191 | 20816.0 |
| class ii glutamine amidotransferase | D9N32_RS21775 | Not Available | Positive | 3975307 - 3976074 | 28637.2 |
| peptidoglycan meso-diaminopimelic acid protein amidase | D9N32_RS21780 | Not Available | Negative | 3976045 - 3976785 | 28022.8 |
| c40 family peptidase | D9N32_RS21785 | Not Available | Positive | 3977086 - 3977835 | 28921.5 |
| type ii toxin-antitoxin system hicb family antitoxin | D9N32_RS21790 | Not Available | Negative | 3977892 - 3978245 | 13244.7 |
| tail fiber assembly protein | D9N32_RS21795 | Not Available | Negative | 3978324 - 3980036 | 62163.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





