Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tail fiber assembly protein | D9N32_RS21645 | Not Available | Negative | 3940548 - 3941997 | 54337.1 |
| type vi secretion system membrane subunit tssm | D9N32_RS21650 | Not Available | Negative | 3942008 - 3945442 | 130879.0 |
| type vi secretion system protein tssa | D9N32_RS21655 | Not Available | Negative | 3945551 - 3946963 | 52281.0 |
| type vi secretion system-associated protein vasi | D9N32_RS21660 | Not Available | Negative | 3946968 - 3947711 | 26423.7 |
| aaa family atpase | D9N32_RS21665 | Not Available | Negative | 3947708 - 3950653 | 107433.0 |
| type ivb secretion system protein icmh/dotu | D9N32_RS21670 | Not Available | Negative | 3950662 - 3951423 | 29373.7 |
| type vi secretion system baseplate subunit tssk | D9N32_RS21675 | Not Available | Negative | 3951428 - 3952759 | 49965.8 |
| type vi secretion system lipoprotein tssj | D9N32_RS21680 | Not Available | Negative | 3952762 - 3953286 | 19395.0 |
| type vi secretion system-associated fha domain protein tagh | D9N32_RS21685 | Not Available | Negative | 3953283 - 3954563 | 47484.9 |
| type vi secretion system baseplate subunit tssg | D9N32_RS21690 | Not Available | Negative | 3954588 - 3955670 | 40258.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





