Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe(3+)-hydroxamate abc transporter substrate-binding protein fhud | D9N32_RS21305 | Not Available | Positive | 3871832 - 3872722 | 33000.2 |
| fe(3+)-hydroxamate abc transporter permease fhub | D9N32_RS21310 | Not Available | Positive | 3872719 - 3874701 | 70470.7 |
| glutamate-1-semialdehyde 2,1-aminomutase | D9N32_RS21315 | Not Available | Negative | 3874736 - 3876016 | 45317.6 |
| protein yadx | D9N32_RS27945 | Not Available | Positive | 3876182 - 3876229 | 1806.13 |
| h(+)/cl(-) exchange transporter clca | D9N32_RS21320 | Not Available | Positive | 3876241 - 3877662 | 50351.9 |
| small protein yadw | D9N32_RS27635 | Not Available | Positive | 3877686 - 3877751 | 2329.94 |
| iron-sulfur cluster insertion protein erpa | D9N32_RS21325 | Not Available | Positive | 3877744 - 3878088 | 12101.2 |
| tric cation channel family protein | D9N32_RS21330 | Not Available | Negative | 3878135 - 3878758 | 22129.1 |
| vitamin b12 abc transporter substrate-binding protein btuf | D9N32_RS21335 | Not Available | Negative | 3878796 - 3879596 | 29352.4 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | D9N32_RS21340 | Not Available | Negative | 3879589 - 3880287 | 24355.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





