Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | D9N32_RS21255 | Not Available | Negative | 3858615 - 3859094 | 17889.6 |
| polynucleotide adenylyltransferase pcnb | D9N32_RS21260 | Not Available | Negative | 3859091 - 3860488 | 53874.0 |
| trna glutamyl-q(34) synthetase gluqrs | D9N32_RS21265 | Not Available | Negative | 3860548 - 3861444 | 33702.0 |
| rna polymerase-binding protein dksa | D9N32_RS21270 | Not Available | Negative | 3861511 - 3861966 | 17528.7 |
| dna/rna nuclease sfsa | D9N32_RS21275 | Not Available | Negative | 3862144 - 3862848 | 26196.2 |
| rna 2',3'-cyclic phosphodiesterase | D9N32_RS21280 | Not Available | Negative | 3862863 - 3863393 | 19951.0 |
| atp-dependent helicase hrpb | D9N32_RS21285 | Not Available | Positive | 3863467 - 3865896 | 89134.2 |
| bifunctional glycosyl transferase/transpeptidase | D9N32_RS21290 | Not Available | Positive | 3865990 - 3868521 | 94115.9 |
| ferrichrome porin fhua | D9N32_RS21295 | Not Available | Positive | 3868741 - 3870984 | 82185.5 |
| fe3+-hydroxamate abc transporter atp-binding protein fhuc | D9N32_RS21300 | Not Available | Positive | 3871035 - 3871832 | 28872.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





