Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate 1-decarboxylase | D9N32_RS21205 | Not Available | Negative | 3848344 - 3848724 | 13834.5 |
| rpn family recombination-promoting nuclease/putative transposase | D9N32_RS21210 | Not Available | Positive | 3848998 - 3849888 | 34190.2 |
| pantoate--beta-alanine ligase | D9N32_RS21215 | Not Available | Negative | 3849970 - 3850821 | 31650.7 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | D9N32_RS21220 | Not Available | Negative | 3850833 - 3851627 | 28179.1 |
| fimbrial-like adhesin | D9N32_RS21225 | Not Available | Negative | 3851741 - 3852991 | 45458.9 |
| fimbrial-like protein | D9N32_RS21230 | Not Available | Negative | 3853043 - 3853642 | 21394.4 |
| fimbrial protein | D9N32_RS21235 | Not Available | Negative | 3853656 - 3854216 | 20135.2 |
| outer membrane usher protein | D9N32_RS21240 | Not Available | Negative | 3854235 - 3856835 | 95449.7 |
| fimbrial chaperone | D9N32_RS21245 | Not Available | Negative | 3856870 - 3857604 | 26353.6 |
| fimbrial protein | D9N32_RS21250 | Not Available | Negative | 3857694 - 3858266 | 19609.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





