Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-lactamase regulator ampe | D9N32_RS21100 | Not Available | Positive | 3821547 - 3822401 | 32097.8 |
| aromatic amino acid transporter arop | D9N32_RS21105 | Not Available | Negative | 3822444 - 3823817 | 49677.1 |
| pyruvate dehydrogenase complex transcriptional repressor pdhr | D9N32_RS21110 | Not Available | Positive | 3824358 - 3825122 | 29427.2 |
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | D9N32_RS21115 | Not Available | Positive | 3825283 - 3827946 | 99674.1 |
| pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | D9N32_RS21120 | Not Available | Positive | 3827961 - 3829853 | 66131.8 |
| dihydrolipoyl dehydrogenase | D9N32_RS21125 | Not Available | Positive | 3830178 - 3831602 | 50691.4 |
| duf3300 domain-containing protein | D9N32_RS21130 | Not Available | Negative | 3831673 - 3833430 | 65753.2 |
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | D9N32_RS21135 | Not Available | Positive | 3833785 - 3836382 | 93489.4 |
| protein yacl | D9N32_RS21145 | Not Available | Positive | 3836579 - 3836941 | 13978.3 |
| adenosylmethionine decarboxylase | D9N32_RS21150 | Not Available | Negative | 3836979 - 3837773 | 30386.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





