Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna gyrase inhibitor yacg | D9N32_RS21055 | Not Available | Negative | 3813915 - 3814112 | 7306.49 |
| cell division protein zapd | D9N32_RS21060 | Not Available | Negative | 3814122 - 3814865 | 28293.3 |
| dephospho-coa kinase | D9N32_RS21065 | Not Available | Negative | 3814865 - 3815485 | 22623.0 |
| protein yacm | D9N32_RS27825 | Not Available | Positive | 3815510 - 3815554 | 1690.26 |
| gmp reductase | D9N32_RS21070 | Not Available | Positive | 3815710 - 3816753 | 37385.8 |
| protein transport protein hofc | D9N32_RS21075 | Not Available | Negative | 3816788 - 3817990 | 44344.1 |
| type ii secretion system protein gspe | D9N32_RS21080 | Not Available | Negative | 3817980 - 3819365 | 50483.3 |
| prepilin peptidase-dependent pilin | D9N32_RS21085 | Not Available | Negative | 3819375 - 3819815 | 15603.6 |
| carboxylating nicotinate-nucleotide diphosphorylase | D9N32_RS21090 | Not Available | Negative | 3820018 - 3820911 | 32764.0 |
| 1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampd | D9N32_RS21095 | Not Available | Positive | 3820999 - 3821550 | 20537.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





