Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-arabinose isomerase | D9N32_RS20855 | Not Available | Negative | 3769217 - 3770719 | 56092.1 |
| ribulokinase | D9N32_RS20860 | Not Available | Negative | 3770730 - 3772430 | 61131.7 |
| arabinose operon transcriptional regulator arac | D9N32_RS20870 | Not Available | Positive | 3772769 - 3773647 | 33404.8 |
| deda family protein | D9N32_RS20875 | Not Available | Positive | 3773733 - 3774497 | 28213.8 |
| thiamine abc transporter atp-binding protein thiq | D9N32_RS20880 | Not Available | Negative | 3774599 - 3775297 | 25011.6 |
| thiamine/thiamine pyrophosphate abc transporter permease thip | D9N32_RS20885 | Not Available | Negative | 3775281 - 3776891 | 59361.6 |
| thiamine abc transporter substrate binding subunit | D9N32_RS20890 | Not Available | Negative | 3776867 - 3777850 | 36208.2 |
| dna-binding transcriptional regulator sgrr | D9N32_RS20895 | Not Available | Negative | 3778014 - 3779669 | 64007.7 |
| glucose uptake inhibitor sgrt | D9N32_RS20900 | Not Available | Positive | 3779758 - 3779889 | 5338.42 |
| sugar efflux transporter seta | D9N32_RS20905 | Not Available | Positive | 3779991 - 3781169 | 42738.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





