Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carnitine metabolism transcriptional regulator caif | D9N32_RS20705 | Not Available | Positive | 3736261 - 3736656 | 15437.1 |
| carnitine operon protein caie | D9N32_RS20710 | Not Available | Negative | 3736775 - 3737365 | 21161.5 |
| crotonobetainyl-coa hydratase | D9N32_RS20715 | Not Available | Negative | 3737371 - 3738156 | 28205.8 |
| crotonobetaine/carnitine-coa ligase | D9N32_RS20720 | Not Available | Negative | 3738265 - 3739818 | 58617.4 |
| l-carnitine coa-transferase | D9N32_RS20725 | Not Available | Negative | 3739892 - 3741109 | 45103.3 |
| crotonobetainyl-coa dehydrogenase | D9N32_RS20730 | Not Available | Negative | 3741227 - 3742369 | 42560.8 |
| l-carnitine/gamma-butyrobetaine antiporter | D9N32_RS20735 | Not Available | Negative | 3742400 - 3743914 | 56608.4 |
| electron transfer flavoprotein fixa | D9N32_RS20740 | Not Available | Positive | 3744387 - 3745157 | 27145.2 |
| electron transfer flavoprotein subunit alpha/fixb family protein | D9N32_RS20745 | Not Available | Positive | 3745172 - 3746113 | 33485.1 |
| fad-dependent oxidoreductase | D9N32_RS20750 | Not Available | Positive | 3746164 - 3747450 | 45689.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





