Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type 1 fimbria minor subunit fimf | D9N32_RS20040 | Not Available | Positive | 3603707 - 3604237 | 18716.3 |
| fimbrial protein | D9N32_RS20045 | Not Available | Positive | 3604310 - 3604753 | 15187.5 |
| type 1 fimbria d-mannose specific adhesin fimh | D9N32_RS20050 | Not Available | Positive | 3604773 - 3605675 | 31475.2 |
| gluconate permease gntp | D9N32_RS20055 | Not Available | Negative | 3605918 - 3607261 | 47141.0 |
| mannonate dehydratase | D9N32_RS20065 | Not Available | Positive | 3607601 - 3608785 | 44840.5 |
| fructuronate reductase | D9N32_RS20070 | Not Available | Positive | 3608866 - 3610326 | 53583.2 |
| uxu operon transcriptional regulator | D9N32_RS20080 | Not Available | Positive | 3610541 - 3611314 | 29309.9 |
| yjfz/yjic family protein | D9N32_RS20085 | Not Available | Negative | 3611455 - 3612285 | 30594.6 |
| protein ytid | D9N32_RS28345 | Not Available | Positive | 3612619 - 3612762 | 5511.39 |
| irad leader peptide idlp | D9N32_RS27630 | Not Available | Positive | 3612878 - 3612961 | 3016.48 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





