Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts sugar transporter subunit iic sgcc | D9N32_RS19930 | Not Available | Negative | 3584896 - 3586209 | 46687.4 |
| pts sugar transporter subunit iib sgcb | D9N32_RS19935 | Not Available | Negative | 3586221 - 3586499 | 9804.04 |
| m42 family metallopeptidase | D9N32_RS19940 | Not Available | Negative | 3586496 - 3587617 | 40617.1 |
| tail fiber assembly protein | D9N32_RS27815 | Not Available | Negative | 3587862 - 3587978 | 4266.17 |
| tail fiber assembly protein | D9N32_RS19945 | Not Available | Negative | 3588016 - 3588234 | 7737.84 |
| sam-dependent methyltransferase | D9N32_RS19950 | Not Available | Negative | 3588403 - 3589149 | 27355.5 |
| gnat family n-acetyltransferase | D9N32_RS19955 | Not Available | Negative | 3589205 - 3589750 | 19958.1 |
| yjhx family toxin | D9N32_RS19960 | Not Available | Negative | 3589762 - 3590019 | 9734.88 |
| hypothetical protein | D9N32_RS28205 | Not Available | Negative | 3590510 - 3590641 | 4869.85 |
| tail fiber assembly protein | D9N32_RS19980 | Not Available | Positive | 3590757 - 3591997 | 47422.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





