Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc-ribbon domain-containing protein | D9N32_RS19750 | Not Available | Negative | 3555364 - 3555798 | 16525.8 |
| putative zinc ribbon protein | D9N32_RS19755 | Not Available | Negative | 3555786 - 3556187 | 15607.3 |
| inovirus gp2 family protein | D9N32_RS19760 | Not Available | Negative | 3556447 - 3557016 | 21881.2 |
| hypothetical protein | D9N32_RS28415 | Not Available | Positive | 3557216 - 3557413 | 7243.05 |
| hypothetical protein | D9N32_RS28420 | Not Available | Negative | 3557634 - 3557801 | 6160.32 |
| helix-turn-helix transcriptional regulator | D9N32_RS19780 | Not Available | Positive | 3558544 - 3558750 | 7761.52 |
| hypothetical protein | D9N32_RS19785 | Not Available | Positive | 3558845 - 3559447 | 23690.5 |
| yfji family protein | D9N32_RS19800 | Not Available | Negative | 3559769 - 3561253 | 55746.4 |
| gtpase family protein | D9N32_RS19805 | Not Available | Positive | 3562484 - 3563356 | 32441.8 |
| autotransporter adhesin ag43 | D9N32_RS19810 | Not Available | Positive | 3563729 - 3566848 | 106678.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





