Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tail fiber assembly protein | D9N32_RS19645 | Not Available | Positive | 3539566 - 3540053 | 17236.9 |
| hypothetical protein | D9N32_RS27625 | Not Available | Positive | 3540136 - 3540393 | 9465.12 |
| fe(3+) dicitrate abc transporter atp-binding protein fece | D9N32_RS19655 | Not Available | Negative | 3540950 - 3541717 | 28192.5 |
| fe(3+) dicitrate abc transporter permease subunit fecd | D9N32_RS19660 | Not Available | Negative | 3541718 - 3542674 | 34133.7 |
| iron-dicitrate abc transporter permease fecc | D9N32_RS19665 | Not Available | Negative | 3542671 - 3543669 | 34894.9 |
| fe(3+) dicitrate abc transporter substrate-binding protein fecb | D9N32_RS19670 | Not Available | Negative | 3543666 - 3544568 | 33108.1 |
| tonb-dependent fe(3+) dicitrate receptor feca | D9N32_RS19675 | Not Available | Negative | 3544613 - 3546937 | 85312.3 |
| ferric citrate uptake sigma factor regulator fecr | D9N32_RS19680 | Not Available | Negative | 3547024 - 3547977 | 35564.1 |
| rna polymerase sigma factor feci | D9N32_RS19685 | Not Available | Negative | 3547974 - 3548495 | 19465.4 |
| protein ykie | D9N32_RS27940 | Not Available | Positive | 3548632 - 3548700 | 2720.32 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





