Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts ascorbate transporter subunit iia | D9N32_RS19170 | Not Available | Positive | 3450154 - 3450618 | 17226.5 |
| 3-keto-l-gulonate-6-phosphate decarboxylase ulad | D9N32_RS19175 | Not Available | Positive | 3450632 - 3451282 | 23650.4 |
| l-ribulose-5-phosphate 3-epimerase ulae | D9N32_RS19180 | Not Available | Positive | 3451292 - 3452146 | 32036.4 |
| l-ribulose-5-phosphate 4-epimerase ulaf | D9N32_RS19185 | Not Available | Positive | 3452146 - 3452832 | 25281.2 |
| duf1471 family protein yjfy | D9N32_RS19190 | Not Available | Negative | 3452961 - 3453236 | 10129.9 |
| 30s ribosomal protein s6 | D9N32_RS19195 | Not Available | Positive | 3453563 - 3453958 | 15187.9 |
| primosomal replication protein n | D9N32_RS19200 | Not Available | Positive | 3453965 - 3454279 | 11472.9 |
| 30s ribosomal protein s18 | D9N32_RS19205 | Not Available | Positive | 3454284 - 3454511 | 8986.94 |
| 50s ribosomal protein l9 | D9N32_RS19210 | Not Available | Positive | 3454553 - 3455002 | 15770.0 |
| duf2686 family protein | D9N32_RS19215 | Not Available | Negative | 3455073 - 3455867 | 29746.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





