Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetracycline efflux mfs transporter tet(b) | D9N32_RS01380 | Not Available | Negative | 110097 - 111302 | 43239.8 |
| tetracycline resistance transcriptional repressor tetr(b) | D9N32_RS01385 | Not Available | Positive | 111384 - 112007 | 23356.0 |
| arsr/smtb family transcription factor | D9N32_RS01390 | Not Available | Negative | 111985 - 112671 | 25297.6 |
| hypothetical protein | D9N32_RS01395 | Not Available | Negative | 112679 - 113065 | 13818.9 |
| antibiotic biosynthesis monooxygenase family protein | D9N32_RS01400 | Not Available | Negative | 113058 - 113321 | 10361.3 |
| is1-like element is1b family transposase | D9N32_RS01405 | Not Available | Negative | 113318 - 114015 | 26558.3 |
| is6-like element is26 family transposase | D9N32_RS01410 | Not Available | Positive | 114204 - 114908 | 27896.9 |
| is3 family transposase | D9N32_RS01415 | Not Available | Negative | 114959 - 115222 | 10045.2 |
| alkene reductase | D9N32_RS01420 | Not Available | Negative | 115288 - 116394 | 40733.1 |
| thioredoxin family protein | D9N32_RS01425 | Not Available | Positive | 116608 - 116937 | 12344.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





