Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein yibt | D9N32_RS15375 | Not Available | Negative | 2672085 - 2672294 | 7995.76 |
| yibl family ribosome-associated protein | D9N32_RS15380 | Not Available | Positive | 2672578 - 2672940 | 13696.8 |
| duf3251 domain-containing protein | D9N32_RS15385 | Not Available | Positive | 2673501 - 2674184 | 25499.9 |
| yada-like family protein | D9N32_RS15390 | Not Available | Positive | 2674228 - 2679255 | 166640.0 |
| l-lactate permease | D9N32_RS15395 | Not Available | Positive | 2679553 - 2681208 | 59202.6 |
| transcriptional regulator lldr | D9N32_RS15400 | Not Available | Positive | 2681208 - 2681984 | 29167.9 |
| quinone-dependent l-lactate dehydrogenase | D9N32_RS15405 | Not Available | Positive | 2681981 - 2683171 | 42700.7 |
| trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trml | D9N32_RS15410 | Not Available | Positive | 2683244 - 2683717 | 17727.3 |
| serine o-acetyltransferase | D9N32_RS15415 | Not Available | Negative | 2683770 - 2684591 | 29318.4 |
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | D9N32_RS15420 | Not Available | Negative | 2684671 - 2685690 | 36363.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





