Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional regulator | D9N32_RS15130 | Not Available | Positive | 2619115 - 2619405 | 11033.5 |
| rna chaperone/antiterminator cspa | D9N32_RS15135 | Not Available | Positive | 2619686 - 2619898 | 7403.66 |
| membrane protein insertion efficiency factor yidd | D9N32_RS15140 | Not Available | Negative | 2619952 - 2620323 | 14060.2 |
| hypothetical protein | D9N32_RS27920 | Not Available | Positive | 2620431 - 2620502 | 2600.31 |
| type i toxin-antitoxin system toxin hoka | D9N32_RS15145 | Not Available | Negative | 2620479 - 2620631 | 5868.43 |
| is3-like element is150 family transposase | D9N32_RS15150 | Not Available | Negative | 2620733 - 2622102 | 53107.1 |
| glycine--trna ligase subunit beta | D9N32_RS15155 | Not Available | Negative | 2622400 - 2624469 | 76799.2 |
| glycine--trna ligase subunit alpha | D9N32_RS15160 | Not Available | Negative | 2624479 - 2625390 | 34718.2 |
| ysab family lipoprotein | D9N32_RS15165 | Not Available | Negative | 2625485 - 2625793 | 11594.2 |
| o-acetyltransferase wech | D9N32_RS15170 | Not Available | Positive | 2625968 - 2626963 | 37620.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





