Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i toxin-antitoxin system toxin ldr family protein | D9N32_RS15015 | Not Available | Negative | 2598921 - 2599028 | 3915.0 |
| type i toxin-antitoxin system toxin ldr family protein | D9N32_RS15025 | Not Available | Negative | 2599404 - 2599511 | 3864.89 |
| type i toxin-antitoxin system toxin ldr family protein | D9N32_RS15030 | Not Available | Negative | 2599888 - 2599995 | 3882.93 |
| aromatic amino acid transport family protein | D9N32_RS15040 | Not Available | Positive | 2600471 - 2601742 | 47333.4 |
| dipeptide abc transporter atp-binding subunit dppf | D9N32_RS15045 | Not Available | Negative | 2601772 - 2602776 | 37559.7 |
| dipeptide abc transporter atp-binding protein | D9N32_RS15050 | Not Available | Negative | 2602773 - 2603756 | 35862.5 |
| dipeptide abc transporter permease dppc | D9N32_RS15055 | Not Available | Negative | 2603767 - 2604669 | 32310.5 |
| dipeptide abc transporter permease dppb | D9N32_RS15060 | Not Available | Negative | 2604679 - 2605698 | 37499.4 |
| dipeptide abc transporter substrate-binding protein dppa | D9N32_RS15070 | Not Available | Negative | 2605849 - 2607456 | 60280.8 |
| Ncrna_class:other | Not Available | Not Available | Positive | 2608085 - 2608220 | Not Available |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





