Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nickel abc transporter permease subunit nikc | D9N32_RS14590 | Not Available | Positive | 2501652 - 2502485 | 30393.9 |
| nickel import atp-binding protein nikd | D9N32_RS14595 | Not Available | Positive | 2502485 - 2503249 | 26845.2 |
| nickel import atp-binding protein nike | D9N32_RS14600 | Not Available | Positive | 2503246 - 2504052 | 29718.5 |
| nickel-responsive transcriptional regulator nikr | D9N32_RS14605 | Not Available | Positive | 2504057 - 2504458 | 15094.7 |
| rhs element core protein | D9N32_RS14610 | Not Available | Positive | 2504661 - 2508848 | 157965.0 |
| hypothetical protein | D9N32_RS14615 | Not Available | Positive | 2508845 - 2509414 | 21919.4 |
| ntf2 fold immunity protein | D9N32_RS14620 | Not Available | Positive | 2509658 - 2509930 | 10294.5 |
| duf6258 family protein | D9N32_RS14630 | Not Available | Positive | 2510513 - 2510797 | 10746.6 |
| pentapeptide repeat-containing protein | D9N32_RS14635 | Not Available | Positive | 2511070 - 2511447 | 13894.5 |
| tail fiber assembly protein | D9N32_RS14640 | Not Available | Positive | 2511419 - 2511795 | 13901.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





