Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter tsga | D9N32_RS14015 | Not Available | Positive | 2380713 - 2381894 | 43125.0 |
| nadph-nitrite reductase large subunit | D9N32_RS14020 | Not Available | Positive | 2382156 - 2384699 | 93112.6 |
| nitrite reductase small subunit nird | D9N32_RS14025 | Not Available | Positive | 2384696 - 2385022 | 12270.6 |
| nitrite transporter nirc | D9N32_RS14030 | Not Available | Positive | 2385148 - 2385954 | 28578.2 |
| siroheme synthase cysg | D9N32_RS14035 | Not Available | Positive | 2385973 - 2387346 | 49954.4 |
| yhfl family protein | D9N32_RS14040 | Not Available | Positive | 2387593 - 2387760 | 5819.16 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | D9N32_RS14045 | Not Available | Negative | 2387867 - 2388952 | 38626.9 |
| yhft family protein | D9N32_RS14050 | Not Available | Negative | 2388964 - 2390268 | 46495.2 |
| duf2620 domain-containing protein | D9N32_RS14055 | Not Available | Negative | 2390280 - 2390633 | 12479.5 |
| phosphotriesterase-related protein | D9N32_RS14060 | Not Available | Negative | 2390644 - 2391522 | 32825.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





