Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alternative ribosome-rescue factor arfa | D9N32_RS13700 | Not Available | Negative | 2341681 - 2341899 | 8171.86 |
| zn(2+)-responsive transcriptional regulator | D9N32_RS13705 | Not Available | Negative | 2341955 - 2342380 | 16196.4 |
| duf1992 domain-containing protein | D9N32_RS13710 | Not Available | Negative | 2342391 - 2342759 | 13972.6 |
| 50s ribosomal protein l17 | D9N32_RS13715 | Not Available | Negative | 2342866 - 2343249 | 14365.4 |
| dna-directed rna polymerase subunit alpha | D9N32_RS13720 | Not Available | Negative | 2343290 - 2344279 | 36513.9 |
| 30s ribosomal protein s4 | D9N32_RS13725 | Not Available | Negative | 2344305 - 2344925 | 23470.5 |
| 30s ribosomal protein s11 | D9N32_RS13730 | Not Available | Negative | 2344959 - 2345348 | 13845.7 |
| 30s ribosomal protein s13 | D9N32_RS13735 | Not Available | Negative | 2345365 - 2345721 | 13100.2 |
| 50s ribosomal protein l36 | D9N32_RS13740 | Not Available | Negative | 2345868 - 2345984 | 4364.59 |
| preprotein translocase subunit secy | D9N32_RS13745 | Not Available | Negative | 2346016 - 2347347 | 48514.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





