Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane lipid asymmetry maintenance protein mlad | D9N32_RS13235 | Not Available | Negative | 2248470 - 2249021 | 19577.3 |
| lipid asymmetry maintenance abc transporter permease subunit mlae | D9N32_RS13240 | Not Available | Negative | 2249026 - 2249808 | 27865.0 |
| phospholipid abc transporter atp-binding protein mlaf | D9N32_RS13245 | Not Available | Negative | 2249816 - 2250625 | 29098.6 |
| calcium/sodium antiporter | D9N32_RS13250 | Not Available | Positive | 2250835 - 2251812 | 34746.8 |
| arabinose-5-phosphate isomerase kdsd | D9N32_RS13255 | Not Available | Positive | 2251826 - 2252812 | 35198.3 |
| 3-deoxy-manno-octulosonate-8-phosphatase kdsc | D9N32_RS13260 | Not Available | Positive | 2252833 - 2253399 | 19998.3 |
| lps export abc transporter periplasmic protein lptc | D9N32_RS13265 | Not Available | Positive | 2253396 - 2253971 | 21703.8 |
| lipopolysaccharide abc transporter substrate-binding protein lpta | D9N32_RS13270 | Not Available | Positive | 2253940 - 2254497 | 20128.1 |
| lps export abc transporter atp-binding protein | D9N32_RS13275 | Not Available | Positive | 2254504 - 2255229 | 26802.3 |
| rna polymerase factor sigma-54 | D9N32_RS13280 | Not Available | Positive | 2255277 - 2256710 | 53996.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





