Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tail fiber assembly protein | D9N32_RS13135 | Not Available | Negative | 2231431 - 2232321 | 33133.8 |
| Trna-leu | Not Available | Not Available | Positive | 2232778 - 2232864 | Not Available |
| preprotein translocase subunit secg | D9N32_RS13145 | Not Available | Negative | 2232879 - 2233211 | 11365.8 |
| phosphoglucosamine mutase | D9N32_RS13150 | Not Available | Negative | 2233439 - 2234776 | 47519.4 |
| dihydropteroate synthase | D9N32_RS13155 | Not Available | Negative | 2234769 - 2235617 | 30632.9 |
| atp-dependent zinc metalloprotease ftsh | D9N32_RS13160 | Not Available | Negative | 2235707 - 2237641 | 70712.3 |
| 23s rrna (uridine(2552)-2'-o)-methyltransferase rlme | D9N32_RS13165 | Not Available | Negative | 2237741 - 2238370 | 23336.4 |
| ribosome assembly rna-binding protein yhby | D9N32_RS13170 | Not Available | Positive | 2238496 - 2238789 | 10784.4 |
| transcription elongation factor grea | D9N32_RS13175 | Not Available | Negative | 2238945 - 2239421 | 17642.0 |
| serine-type d-ala-d-ala carboxypeptidase | D9N32_RS13180 | Not Available | Positive | 2239669 - 2241102 | 51801.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





