Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer mating-pair stabilization protein trag | D9N32_RS00860 | Not Available | Positive | 29416 - 32241 | 103071.0 |
| conjugal transfer entry exclusion protein tras | D9N32_RS00865 | Not Available | Positive | 32238 - 32747 | 19463.7 |
| conjugal transfer complement resistance protein trat | D9N32_RS00870 | Not Available | Positive | 32761 - 33492 | 25875.1 |
| type iv conjugative transfer system coupling protein trad | D9N32_RS00880 | Not Available | Positive | 33744 - 35942 | 83286.5 |
| conjugative transfer relaxase/helicase trai | D9N32_RS00885 | Not Available | Positive | 35942 - 41062 | 186754.0 |
| conjugal transfer pilus acetylase trax | D9N32_RS00890 | Not Available | Positive | 41082 - 41828 | 27352.7 |
| fertility inhibition protein fino | D9N32_RS00895 | Not Available | Positive | 41883 - 42443 | 21178.7 |
| hypothetical protein | D9N32_RS00900 | Not Available | Positive | 42577 - 42789 | 8244.81 |
| is3 family transposase | D9N32_RS27740 | Not Available | Negative | 43090 - 43179 | 3398.12 |
| is66-like element accessory protein tnpa | D9N32_RS00915 | Not Available | Positive | 43234 - 43911 | 25207.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





