Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | D9N32_RS13035 | Not Available | Negative | 2210191 - 2210694 | 18481.8 |
| ubiquinone anaerobic biosynthesis accessory factor ubit | D9N32_RS13040 | Not Available | Negative | 2210688 - 2211212 | 19644.9 |
| ubiquinone anaerobic biosynthesis protein ubiu | D9N32_RS13045 | Not Available | Positive | 2211421 - 2212416 | 37015.2 |
| u32 family peptidase | D9N32_RS13050 | Not Available | Positive | 2212425 - 2213303 | 32567.1 |
| luciferase-like monooxygenase | D9N32_RS13055 | Not Available | Positive | 2213384 - 2214391 | 37157.5 |
| tryptophan permease | D9N32_RS13060 | Not Available | Negative | 2214509 - 2215753 | 44381.3 |
| atp-dependent rna helicase dead | D9N32_RS13065 | Not Available | Negative | 2215907 - 2217796 | 70550.5 |
| protein yrbn | D9N32_RS13070 | Not Available | Negative | 2217789 - 2217869 | 2979.59 |
| lipoprotein nlpi | D9N32_RS13075 | Not Available | Negative | 2217976 - 2218860 | 33622.5 |
| polyribonucleotide nucleotidyltransferase | D9N32_RS13080 | Not Available | Negative | 2218969 - 2221104 | 77119.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





