Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enamine/imine deaminase | D9N32_RS12835 | Not Available | Negative | 2172962 - 2173351 | 14008.0 |
| 2-ketobutyrate formate-lyase/pyruvate formate-lyase | D9N32_RS12840 | Not Available | Negative | 2173365 - 2175659 | 86009.5 |
| propionate kinase | D9N32_RS12845 | Not Available | Negative | 2175693 - 2176901 | 43372.7 |
| threonine/serine transporter tdcc | D9N32_RS12850 | Not Available | Negative | 2176927 - 2178258 | 48895.8 |
| bifunctional threonine ammonia-lyase/l-serine ammonia-lyase tdcb | D9N32_RS12855 | Not Available | Negative | 2178280 - 2179269 | 35234.5 |
| transcriptional regulator tdca | D9N32_RS12860 | Not Available | Negative | 2179368 - 2180306 | 34540.9 |
| transcriptional activator tdcr | D9N32_RS27900 | Not Available | Positive | 2180621 - 2180839 | 8577.16 |
| protein yhab | D9N32_RS12870 | Not Available | Positive | 2181095 - 2181634 | 20560.6 |
| yhac family protein | D9N32_RS12875 | Not Available | Positive | 2181656 - 2182843 | 45211.4 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 2183234 - 2183610 | Not Available |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





