Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadph-dependent 2,4-dienoyl-coa reductase | D9N32_RS12685 | Not Available | Positive | 2144861 - 2146879 | 72690.7 |
| 23s rrna (guanine(1835)-n(2))-methyltransferase rlmg | D9N32_RS12690 | Not Available | Negative | 2146997 - 2148133 | 42312.8 |
| m48 family metallopeptidase | D9N32_RS12695 | Not Available | Positive | 2148218 - 2148721 | 19443.6 |
| vancomycin high temperature exclusion protein | D9N32_RS12700 | Not Available | Positive | 2148798 - 2149490 | 25534.3 |
| gfo/idh/moca family protein | D9N32_RS12705 | Not Available | Positive | 2149569 - 2150555 | 36350.4 |
| terc family membrane protein alx | D9N32_RS12710 | Not Available | Positive | 2150839 - 2151804 | 35983.1 |
| serine/threonine transporter sstt | D9N32_RS12715 | Not Available | Positive | 2152420 - 2153664 | 43480.4 |
| ygjv family protein | D9N32_RS12720 | Not Available | Negative | 2153669 - 2154220 | 20566.7 |
| altronate dehydratase | D9N32_RS12725 | Not Available | Negative | 2154303 - 2155790 | 54126.2 |
| glucuronate isomerase | D9N32_RS12730 | Not Available | Negative | 2155805 - 2157217 | 53990.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





