Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i toxin-antitoxin system toxin ibse | D9N32_RS12525 | Not Available | Positive | 2108693 - 2108752 | 2207.06 |
| bifunctional d-glycero-beta-d-manno-heptose-7-phosphate kinase/d-glycero-beta-d-manno-heptose 1-phosphate adenylyltransferase hlde | D9N32_RS12530 | Not Available | Negative | 2108872 - 2110305 | 51053.6 |
| bifunctional | D9N32_RS12535 | Not Available | Negative | 2110353 - 2113193 | 108425.0 |
| inorganic triphosphatase | D9N32_RS12540 | Not Available | Negative | 2113216 - 2114517 | 48528.8 |
| tigr04211 family sh3 domain-containing protein | D9N32_RS12550 | Not Available | Positive | 2114759 - 2115379 | 23077.7 |
| fused trna nucleotidyltransferase/2',3'-cyclic phosphodiesterase/2' nucleotidase/phosphatase cca | D9N32_RS12555 | Not Available | Positive | 2115443 - 2116681 | 46483.8 |
| undecaprenyl-diphosphate phosphatase | D9N32_RS12560 | Not Available | Negative | 2116762 - 2117583 | 29774.7 |
| bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase | D9N32_RS12565 | Not Available | Negative | 2117674 - 2118042 | 13620.2 |
| glycerol-3-phosphate 1-o-acyltransferase plsy | D9N32_RS12570 | Not Available | Positive | 2118147 - 2118764 | 22194.7 |
| l-tartrate utilization transcriptional activator ttdr | D9N32_RS12575 | Not Available | Negative | 2118777 - 2119709 | 35358.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





