Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathionylspermidine synthase family protein | D9N32_RS12475 | Not Available | Positive | 2100194 - 2101354 | 45028.4 |
| 4,5-dopa dioxygenase extradiol | D9N32_RS12480 | Not Available | Negative | 2101392 - 2102180 | 28893.7 |
| zinc transporter zupt | D9N32_RS12485 | Not Available | Positive | 2102323 - 2103096 | 26486.5 |
| protein yqid | D9N32_RS12490 | Not Available | Negative | 2103154 - 2103324 | 6810.31 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | D9N32_RS12495 | Not Available | Negative | 2103586 - 2104239 | 23354.9 |
| ubiquinone biosynthesis accessory factor ubik | D9N32_RS12500 | Not Available | Positive | 2104613 - 2104903 | 11276.7 |
| tail fiber assembly protein | D9N32_RS12505 | Not Available | Positive | 2105187 - 2105558 | 12969.5 |
| is1 family transposase | D9N32_RS12510 | Not Available | Positive | 2105615 - 2106312 | 26568.3 |
| flotillin family protein | D9N32_RS12515 | Not Available | Positive | 2106416 - 2108077 | 60703.2 |
| type i toxin-antitoxin system ibs family toxin | D9N32_RS12520 | Not Available | Positive | 2108318 - 2108377 | 2150.99 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





