Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2645 family protein | D9N32_RS12420 | Not Available | Negative | 2091652 - 2091984 | 13187.7 |
| nadph:quinone oxidoreductase mdab | D9N32_RS12425 | Not Available | Positive | 2092303 - 2092884 | 21892.1 |
| putative quinol monooxygenase | D9N32_RS12430 | Not Available | Positive | 2092915 - 2093229 | 11533.1 |
| dna topoisomerase iv subunit b | D9N32_RS12435 | Not Available | Negative | 2093277 - 2095169 | 70231.9 |
| esterase yqia | D9N32_RS12440 | Not Available | Negative | 2095198 - 2095779 | 21642.7 |
| 3',5'-cyclic-amp phosphodiesterase | D9N32_RS12445 | Not Available | Negative | 2095779 - 2096606 | 30939.7 |
| duf1249 family protein | D9N32_RS12450 | Not Available | Negative | 2096631 - 2097053 | 16549.0 |
| adp-ribose diphosphatase | D9N32_RS12455 | Not Available | Negative | 2097054 - 2097683 | 23668.2 |
| outer membrane channel protein tolc | D9N32_RS12460 | Not Available | Positive | 2097888 - 2099369 | 53743.7 |
| duf1190 family protein | D9N32_RS12470 | Not Available | Positive | 2099517 - 2100188 | 23480.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





