Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb system transport protein exbd | D9N32_RS12315 | Not Available | Negative | 2070591 - 2071016 | 15527.9 |
| tol-pal system-associated acyl-coa thioesterase | D9N32_RS12320 | Not Available | Negative | 2071023 - 2071757 | 26289.0 |
| cystathionine beta-lyase | D9N32_RS12330 | Not Available | Positive | 2072009 - 2073196 | 43214.8 |
| deda family general envelope maintenance protein yghb | D9N32_RS12335 | Not Available | Positive | 2073336 - 2073995 | 24135.3 |
| dna-binding transcriptional regulator yqhc | D9N32_RS12340 | Not Available | Negative | 2074035 - 2074934 | 33817.1 |
| alcohol dehydrogenase | D9N32_RS12345 | Not Available | Positive | 2075128 - 2076291 | 42099.4 |
| 2,5-didehydrogluconate reductase dkga | D9N32_RS12350 | Not Available | Positive | 2076396 - 2077223 | 31111.4 |
| ybjp/yqhg family protein | D9N32_RS12355 | Not Available | Positive | 2077423 - 2078349 | 34975.0 |
| lipoprotein yqhh | D9N32_RS12360 | Not Available | Positive | 2078400 - 2078657 | 9513.58 |
| ygiq family radical sam protein | D9N32_RS12365 | Not Available | Negative | 2078700 - 2080919 | 83482.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





