Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hyad/hybd family hydrogenase maturation endopeptidase | D9N32_RS12260 | Not Available | Negative | 2060565 - 2061059 | 17751.8 |
| hydrogenase 2 large subunit | D9N32_RS12265 | Not Available | Negative | 2061059 - 2062762 | 62494.6 |
| ni/fe-hydrogenase cytochrome b subunit | D9N32_RS12270 | Not Available | Negative | 2062759 - 2063937 | 43604.6 |
| hydrogenase 2 operon protein hyba | D9N32_RS12275 | Not Available | Negative | 2063927 - 2064913 | 36005.0 |
| hydrogenase 2 small subunit | D9N32_RS12280 | Not Available | Negative | 2064916 - 2066034 | 39654.3 |
| duf2623 family protein yghw | D9N32_RS12290 | Not Available | Negative | 2066223 - 2066510 | 10946.1 |
| tail fiber assembly protein | D9N32_RS12295 | Not Available | Negative | 2066629 - 2067513 | 31608.2 |
| l-glyceraldehyde 3-phosphate reductase | D9N32_RS12300 | Not Available | Positive | 2067670 - 2068710 | 38834.4 |
| tigr00645 family protein | D9N32_RS12305 | Not Available | Negative | 2068750 - 2069244 | 18642.3 |
| nadp(+)-dependent aldehyde reductase | D9N32_RS12310 | Not Available | Positive | 2069435 - 2070319 | 31489.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





