Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system pilot lipoprotein gsps-beta | D9N32_RS12110 | Not Available | Negative | 2025681 - 2026091 | 14670.9 |
| prepilin peptidase pppa | D9N32_RS12115 | Not Available | Negative | 2026157 - 2026966 | 29404.7 |
| lipoprotein metalloprotease ssle | D9N32_RS12125 | Not Available | Negative | 2027130 - 2031689 | 167330.0 |
| glycolate permease glca | D9N32_RS12130 | Not Available | Negative | 2032175 - 2033857 | 58923.7 |
| malate synthase g | D9N32_RS12135 | Not Available | Negative | 2034212 - 2036383 | 80493.2 |
| glcg family protein | D9N32_RS12140 | Not Available | Negative | 2036405 - 2036809 | 13737.5 |
| glycolate oxidase subunit glcf | D9N32_RS12145 | Not Available | Negative | 2036814 - 2038037 | 45112.8 |
| glycolate oxidase subunit glce | D9N32_RS12150 | Not Available | Negative | 2038048 - 2039100 | 38303.2 |
| glycolate oxidase subunit glcd | D9N32_RS12155 | Not Available | Negative | 2039100 - 2040599 | 53814.9 |
| transcriptional regulator glcc | D9N32_RS12160 | Not Available | Positive | 2040850 - 2041614 | 28827.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





