Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-manno-octulosonate cytidylyltransferase | D9N32_RS12010 | Not Available | Positive | 2002722 - 2003462 | 27146.6 |
| capsular polysaccharide biosynthesis protein | D9N32_RS12015 | Not Available | Positive | 2003459 - 2005486 | 75687.6 |
| capsule biosynthesis protein | D9N32_RS12020 | Not Available | Positive | 2005521 - 2006753 | 49000.3 |
| hypothetical protein | D9N32_RS12025 | Not Available | Negative | 2007007 - 2007966 | 36667.0 |
| hypothetical protein | D9N32_RS12030 | Not Available | Negative | 2008001 - 2009140 | 44527.9 |
| bifunctional cytidylyltransferase/sdr family oxidoreductase | D9N32_RS12035 | Not Available | Negative | 2009715 - 2011088 | 50191.3 |
| cdp-glycerol glycerophosphotransferase family protein | D9N32_RS12040 | Not Available | Negative | 2011106 - 2012458 | 51578.8 |
| abc transporter atp-binding protein | D9N32_RS12045 | Not Available | Negative | 2012691 - 2013368 | 25347.5 |
| abc transporter permease | D9N32_RS12050 | Not Available | Negative | 2013365 - 2014141 | 29507.3 |
| gspm family type ii secretion system protein yghd | D9N32_RS12055 | Not Available | Negative | 2015202 - 2015738 | 20358.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





