Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D9N32_RS11905 | Not Available | Positive | 1988136 - 1988945 | 31890.4 |
| hypothetical protein | D9N32_RS11910 | Not Available | Negative | 1988942 - 1989874 | 36360.7 |
| gtpase family protein | D9N32_RS11915 | Not Available | Positive | 1989981 - 1990865 | 33125.9 |
| hypothetical protein | D9N32_RS11920 | Not Available | Positive | 1990984 - 1991661 | 24356.1 |
| duf905 family protein | D9N32_RS11925 | Not Available | Positive | 1991691 - 1991900 | 8036.43 |
| duf932 domain-containing protein | D9N32_RS11930 | Not Available | Positive | 1991991 - 1992809 | 31176.4 |
| antirestriction protein | D9N32_RS11935 | Not Available | Positive | 1992901 - 1993386 | 18225.4 |
| radc family protein | D9N32_RS11945 | Not Available | Positive | 1993402 - 1993878 | 17683.4 |
| duf987 domain-containing protein | D9N32_RS11950 | Not Available | Positive | 1993947 - 1994168 | 8409.23 |
| type iv toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin cbea | D9N32_RS11955 | Not Available | Positive | 1994248 - 1994622 | 13730.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





