Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tail fiber assembly protein | D9N32_RS11725 | Not Available | Negative | 1963426 - 1963689 | 9036.87 |
| adhesin biosynthesis transcription regulatory family protein | D9N32_RS11730 | Not Available | Negative | 1963896 - 1964210 | 11696.2 |
| faea/papi family transcriptional regulator | D9N32_RS11745 | Not Available | Positive | 1964633 - 1964911 | 10411.8 |
| tail fiber assembly protein | D9N32_RS11750 | Not Available | Positive | 1964845 - 1965501 | 23968.1 |
| duf3363 domain-containing protein | D9N32_RS28090 | Not Available | Positive | 1965532 - 1966416 | 33024.4 |
| chloramphenicol/florfenicol efflux mfs transporter flor | D9N32_RS11760 | Not Available | Positive | 1966633 - 1967847 | 42715.4 |
| lysr family transcriptional regulator | D9N32_RS11765 | Not Available | Positive | 1967875 - 1968180 | 11146.6 |
| tail fiber assembly protein | D9N32_RS11770 | Not Available | Positive | 1968292 - 1968480 | 7406.65 |
| tetracycline efflux mfs transporter tet(a) | D9N32_RS11775 | Not Available | Negative | 1968447 - 1969646 | 42380.7 |
| tetracycline resistance transcriptional repressor tetr(a) | D9N32_RS11780 | Not Available | Positive | 1969752 - 1970402 | 23379.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





