Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| restriction endonuclease subunit s | D9N32_RS11660 | Not Available | Negative | 1948852 - 1949994 | 43499.9 |
| type i restriction-modification system subunit m | D9N32_RS11665 | Not Available | Negative | 1949991 - 1951625 | 61690.8 |
| dead/deah box helicase family protein | D9N32_RS11670 | Not Available | Negative | 1951689 - 1955102 | 131161.0 |
| tail fiber assembly protein | D9N32_RS11680 | Not Available | Positive | 1955710 - 1956224 | 17222.5 |
| mazg-like family protein | D9N32_RS11685 | Not Available | Negative | 1956524 - 1956790 | 9868.6 |
| xre family transcriptional regulator | D9N32_RS11695 | Not Available | Positive | 1957257 - 1958339 | 41516.1 |
| hypothetical protein | D9N32_RS11700 | Not Available | Negative | 1958342 - 1959286 | 35623.1 |
| thymidylate synthase | D9N32_RS11705 | Not Available | Negative | 1959283 - 1960263 | 37507.5 |
| tail fiber assembly protein | D9N32_RS11710 | Not Available | Positive | 1960431 - 1961592 | 40952.5 |
| deoxyguanosinetriphosphate triphosphohydrolase family protein | D9N32_RS11715 | Not Available | Positive | 1961743 - 1962975 | 47228.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





