Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-asparaginase 2 | D9N32_RS11500 | Not Available | Negative | 1916271 - 1917317 | 36880.8 |
| duf2884 domain-containing protein | D9N32_RS11505 | Not Available | Negative | 1917493 - 1918212 | 26430.8 |
| yggl family protein | D9N32_RS11510 | Not Available | Negative | 1918396 - 1918722 | 12881.2 |
| trna (guanosine(46)-n7)-methyltransferase trmb | D9N32_RS11515 | Not Available | Negative | 1918722 - 1919441 | 27308.9 |
| a/g-specific adenine glycosylase | D9N32_RS11520 | Not Available | Positive | 1919602 - 1920654 | 39151.2 |
| oxidative damage protection protein | D9N32_RS11525 | Not Available | Positive | 1920682 - 1920957 | 10953.2 |
| membrane-bound lytic murein transglycosylase mltc | D9N32_RS11530 | Not Available | Positive | 1921022 - 1922101 | 40114.7 |
| nucleoside permease nupg | D9N32_RS11535 | Not Available | Positive | 1922303 - 1923559 | 46392.0 |
| ornithine decarboxylase | D9N32_RS11540 | Not Available | Negative | 1923608 - 1925743 | 79391.5 |
| hypothetical protein | D9N32_RS27890 | Not Available | Negative | 1925906 - 1925983 | 2979.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





