Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| agmatinase | D9N32_RS11400 | Not Available | Negative | 1899454 - 1900374 | 33558.9 |
| biosynthetic arginine decarboxylase | D9N32_RS11405 | Not Available | Negative | 1900512 - 1902488 | 73890.6 |
| acid stress response protein yqgb | D9N32_RS11410 | Not Available | Negative | 1902497 - 1902628 | 4847.02 |
| protein yqgg | D9N32_RS28310 | Not Available | Negative | 1902722 - 1902865 | 5220.17 |
| protein yqgd | D9N32_RS28315 | Not Available | Negative | 1902976 - 1903227 | 9562.84 |
| methionine adenosyltransferase | D9N32_RS11425 | Not Available | Positive | 1903283 - 1904437 | 41954.0 |
| galactose/proton symporter | D9N32_RS11430 | Not Available | Positive | 1904873 - 1906267 | 50985.6 |
| sprt family zinc-dependent metalloprotease | D9N32_RS11435 | Not Available | Positive | 1906344 - 1906841 | 19349.6 |
| deoxyribonuclease i | D9N32_RS11440 | Not Available | Positive | 1906936 - 1907643 | 26710.5 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | D9N32_RS11445 | Not Available | Positive | 1907723 - 1908454 | 26979.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





