Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycerate kinase | D9N32_RS11350 | Not Available | Negative | 1888036 - 1889199 | 41120.5 |
| erythrose-4-phosphate dehydrogenase | D9N32_RS11355 | Not Available | Negative | 1889249 - 1890268 | 37202.4 |
| nucleoside/nucleotide kinase family protein | D9N32_RS11360 | Not Available | Negative | 1890553 - 1891266 | 27133.4 |
| fumarase e | D9N32_RS11365 | Not Available | Negative | 1891263 - 1891772 | 19173.8 |
| class ii fructose-bisphosphatase | D9N32_RS11370 | Not Available | Negative | 1891794 - 1892759 | 34325.5 |
| zinc-binding dehydrogenase | D9N32_RS11375 | Not Available | Negative | 1892756 - 1894033 | 45820.2 |
| pts mannitol transporter subunit iicb | D9N32_RS11380 | Not Available | Negative | 1894048 - 1895436 | 48959.1 |
| pts mannitol transporter subunit iia | D9N32_RS11385 | Not Available | Negative | 1895464 - 1895907 | 16047.1 |
| transketolase | D9N32_RS11390 | Not Available | Negative | 1896221 - 1898212 | 72215.7 |
| metalloprotease loip | D9N32_RS11395 | Not Available | Positive | 1898490 - 1899248 | 26902.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





