Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xaa-pro aminopeptidase | D9N32_RS11255 | Not Available | Negative | 1870092 - 1871417 | 49836.2 |
| upf0149 family protein ygfb | D9N32_RS11260 | Not Available | Negative | 1871443 - 1872021 | 21230.8 |
| cell division protein zapa | D9N32_RS11265 | Not Available | Positive | 1872189 - 1872518 | 12594.9 |
| Ncrna_class:other | Not Available | Not Available | Positive | 1872560 - 1872743 | Not Available |
| 5-formyltetrahydrofolate cyclo-ligase | D9N32_RS11275 | Not Available | Positive | 1872764 - 1873366 | 23284.5 |
| type i toxin-antitoxin system toxin ibsc | D9N32_RS11280 | Not Available | Negative | 1873467 - 1873526 | 2209.04 |
| phosphoglycerate dehydrogenase | D9N32_RS11285 | Not Available | Negative | 1873755 - 1874987 | 44178.4 |
| ribose-5-phosphate isomerase rpia | D9N32_RS11290 | Not Available | Negative | 1875243 - 1875902 | 22861.8 |
| hypothetical protein | D9N32_RS11295 | Not Available | Negative | 1875958 - 1876188 | 8390.57 |
| dna-binding transcriptional regulator argp | D9N32_RS11300 | Not Available | Positive | 1876330 - 1877223 | 33473.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





