Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isopentenyl-diphosphate delta-isomerase | D9N32_RS11160 | Not Available | Positive | 1849764 - 1850312 | 20404.1 |
| lysine--trna ligase | D9N32_RS11165 | Not Available | Negative | 1850355 - 1851872 | 57620.8 |
| peptide chain release factor 2 | D9N32_RS11170 | Not Available | Negative | 1851882 - 1852980 | 41222.9 |
| single-stranded-dna-specific exonuclease recj | D9N32_RS11175 | Not Available | Negative | 1853071 - 1854804 | 63366.6 |
| bifunctional protein-disulfide isomerase/oxidoreductase dsbc | D9N32_RS11180 | Not Available | Negative | 1854810 - 1855520 | 25633.1 |
| site-specific tyrosine recombinase xerd | D9N32_RS11185 | Not Available | Negative | 1855544 - 1856440 | 34248.4 |
| flavodoxin fldb | D9N32_RS11190 | Not Available | Positive | 1856552 - 1857073 | 19701.2 |
| protein ygfx | D9N32_RS11195 | Not Available | Negative | 1857107 - 1857520 | 16338.3 |
| fad assembly factor sdhe | D9N32_RS11200 | Not Available | Negative | 1857501 - 1857767 | 10547.7 |
| pp_01774 | D9N32_RS11205 | Not Available | Positive | 1858010 - 1858990 | Not Available |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





