Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid permease | D9N32_RS11115 | Not Available | Positive | 1841737 - 1842966 | 45101.9 |
| hypothetical protein | D9N32_RS11120 | Not Available | Positive | 1843426 - 1843995 | 21864.2 |
| tail fiber assembly protein | D9N32_RS11125 | Not Available | Positive | 1844042 - 1845201 | 41354.1 |
| tail fiber assembly protein | D9N32_RS11130 | Not Available | Negative | 1845236 - 1845781 | 20343.3 |
| Trna-gly | Not Available | Not Available | Positive | 1846007 - 1846080 | Not Available |
| amidase activator acts | D9N32_RS11140 | Not Available | Negative | 1846159 - 1846914 | 26596.1 |
| is1-like element is1a family transposase | D9N32_RS11145 | Not Available | Negative | 1847041 - 1847738 | 26452.3 |
| urate/proton symporter uact | D9N32_RS11150 | Not Available | Positive | 1848066 - 1849514 | 51761.4 |
| protein yqfg | D9N32_RS11155 | Not Available | Positive | 1849516 - 1849641 | 4791.29 |
| protein yqfh | D9N32_RS27535 | Not Available | Negative | 1849638 - 1849709 | 2617.29 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





