Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | Positive | 1803494 - 1803570 | Not Available |
| n-acetylmuramoyl-l-alanine amidase amic | D9N32_RS10965 | Not Available | Negative | 1803644 - 1804897 | 45637.1 |
| amino-acid n-acetyltransferase | D9N32_RS10975 | Not Available | Positive | 1805129 - 1806460 | 49198.1 |
| exodeoxyribonuclease v subunit alpha | D9N32_RS10980 | Not Available | Negative | 1806522 - 1808348 | 66892.3 |
| exodeoxyribonuclease v subunit beta | D9N32_RS10985 | Not Available | Negative | 1808348 - 1811890 | 134070.0 |
| pitrilysin | D9N32_RS10990 | Not Available | Negative | 1811883 - 1814771 | 107748.0 |
| exodeoxyribonuclease v subunit gamma | D9N32_RS10995 | Not Available | Negative | 1814947 - 1818315 | 128839.0 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | D9N32_RS11000 | Not Available | Negative | 1818328 - 1818651 | 11956.6 |
| duf2509 family protein | D9N32_RS11005 | Not Available | Negative | 1818636 - 1819043 | 14785.0 |
| prepilin peptidase-dependent protein | D9N32_RS11010 | Not Available | Negative | 1819040 - 1819603 | 20479.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





