Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | D9N32_RS10905 | Not Available | Negative | 1796030 - 1797130 | 41907.5 |
| duf423 domain-containing protein | D9N32_RS10910 | Not Available | Negative | 1797123 - 1797518 | 14334.0 |
| glycine cleavage system transcriptional regulator gcva | D9N32_RS10915 | Not Available | Negative | 1797537 - 1798454 | 34403.4 |
| ygdi/ygdr family lipoprotein | D9N32_RS10920 | Not Available | Negative | 1798805 - 1799032 | 8174.67 |
| cysteine desulfurase csda | D9N32_RS10925 | Not Available | Positive | 1799224 - 1800429 | 43236.6 |
| cysteine desulfurase sulfur acceptor subunit csde | D9N32_RS10930 | Not Available | Positive | 1800429 - 1800872 | 15941.2 |
| trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcda | D9N32_RS10935 | Not Available | Negative | 1800923 - 1801729 | 28563.6 |
| murein transglycosylase a | D9N32_RS10940 | Not Available | Negative | 1801968 - 1803065 | 40412.9 |
| Trna-met | Not Available | Not Available | Positive | 1803274 - 1803350 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 1803384 - 1803460 | Not Available |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





