Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-fuculose-phosphate aldolase | D9N32_RS10855 | Not Available | Negative | 1784015 - 1784662 | 23899.9 |
| laci family dna-binding transcriptional regulator | D9N32_RS10860 | Not Available | Negative | 1784795 - 1785793 | 37424.3 |
| fggy-family carbohydrate kinase | D9N32_RS10865 | Not Available | Negative | 1785858 - 1787438 | 57078.9 |
| abc transporter substrate-binding protein | D9N32_RS10870 | Not Available | Negative | 1787491 - 1788441 | 33751.4 |
| abc transporter permease | D9N32_RS10875 | Not Available | Negative | 1788515 - 1789498 | 34577.0 |
| sugar abc transporter atp-binding protein | D9N32_RS10880 | Not Available | Negative | 1789502 - 1791001 | 55916.9 |
| l-fucose isomerase | D9N32_RS10885 | Not Available | Positive | 1791471 - 1793246 | 65038.3 |
| l-fuculokinase | D9N32_RS10890 | Not Available | Positive | 1793355 - 1794773 | 52214.6 |
| l-fucose mutarotase | D9N32_RS10895 | Not Available | Positive | 1794775 - 1795197 | 15474.0 |
| l-fucose operon activator | D9N32_RS10900 | Not Available | Positive | 1795255 - 1795986 | 27375.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





