Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavodoxin | D9N32_RS10805 | Not Available | Negative | 1773509 - 1773958 | 16284.1 |
| trna pseudouridine(65) synthase truc | D9N32_RS10810 | Not Available | Negative | 1773976 - 1774758 | 29681.5 |
| yqcc family protein | D9N32_RS10815 | Not Available | Negative | 1774758 - 1775087 | 12745.1 |
| secy-interacting protein | D9N32_RS10820 | Not Available | Negative | 1775709 - 1776254 | 20656.5 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | D9N32_RS10825 | Not Available | Positive | 1776322 - 1777170 | 32561.2 |
| nucleotide 5'-monophosphate nucleosidase ppnn | D9N32_RS10830 | Not Available | Positive | 1777282 - 1778646 | 50975.0 |
| haaap family serine/threonine permease sdac | D9N32_RS10835 | Not Available | Positive | 1779203 - 1780492 | 46909.2 |
| l-serine ammonia-lyase ii | D9N32_RS10840 | Not Available | Positive | 1780550 - 1781917 | 48724.8 |
| flap endonuclease xni | D9N32_RS10845 | Not Available | Positive | 1782029 - 1782784 | 28167.7 |
| lactaldehyde reductase | D9N32_RS10850 | Not Available | Negative | 1782839 - 1783987 | 40496.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





