Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain WCHEC000837 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain WCHEC000837 plasmid pNDM4_000837, complete
Gene Summary
Adenine Count
11103 bp
Thymine Count
11055 bp
Guanine Count
11694 bp
Cytosine Count
11632 bp
Genome Length
45484 bp
Protein-coding Genes
32 genes
Non-Coding Genes
22 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfate adenylyltransferase subunit cysd | D9N32_RS10600 | Not Available | Negative | 1725055 - 1725963 | 35205.3 |
| alkaline phosphatase isozyme conversion aminopeptidase | D9N32_RS10605 | Not Available | Positive | 1726215 - 1727252 | 37847.2 |
| type i-e crispr-associated endoribonuclease cas2e | D9N32_RS10610 | Not Available | Negative | 1728008 - 1728301 | 10976.3 |
| type i-e crispr-associated endonuclease cas1e | D9N32_RS10615 | Not Available | Negative | 1728298 - 1729221 | 33426.7 |
| type i-e crispr-associated protein cas6/cse3/case | D9N32_RS10620 | Not Available | Negative | 1729218 - 1729868 | 24724.8 |
| type i-e crispr-associated protein cas5/casd | D9N32_RS10625 | Not Available | Negative | 1729850 - 1730596 | 28680.1 |
| type i-e crispr-associated protein cas7/cse4/casc | D9N32_RS10630 | Not Available | Negative | 1730607 - 1731662 | 38432.7 |
| type i-e crispr-associated protein cse2/casb | D9N32_RS10635 | Not Available | Negative | 1731677 - 1732213 | 20687.6 |
| type i-e crispr-associated protein cse1/casa | D9N32_RS10640 | Not Available | Negative | 1732210 - 1733772 | 59169.5 |
| crispr-associated helicase/endonuclease cas3 | D9N32_RS10645 | Not Available | Negative | 1733870 - 1736569 | 101842.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





